GeneMind SURFSeq 5000 High-Throughput Sequencing System

GeneMind SURFSeq 5000 High-Throughput Sequencing System - Image 2

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GeneMind SURFSeq 5000 High-Throughput Sequencing System

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Features

SURFSeq 5000 is a bench-top high-throughput sequencing platform with multiple application scenarios, fast sequencing speed, good data quality, and low startup cost. Its versatile function can meet the different performance requirements of users in whole genome sequencing, targeted sequencing, transcriptome sequencing, metagenomic sequencing, methylation sequencing, and other technical fields. SURFSeq 5000 can fully assist end-users whether in scientific discovery research or clinical diagnosis usage.

SKU: GENEMIND-SURFSEQ-5000 Category: Sequencing Instruments Tags: GeneMind, genomics, high-throughput sequencing system, Molecular Diagnostics, Scientific China Brand: GeneMind

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Additional information

Additional information

Weight	240kg
Operating Environment	Temperature:19℃-25℃ Humidity:20%-80% relative humidity, non-condensing Altitude: below 300m
Instrument Control Computer	Operating System:Windows 10 x64 CPU: Intel Xeon Gold 6342 Memory:256GB Hard Drive1: 2TB SSD Hard Drive2: 17TB HDD
Parameter	Description

Description

GeneMind SURFSeq 5000 High-Throughput Sequencing System

Product overview

Key features

Wide range of application: Dual flow cell to support 5 different modes/run. Compatible with most common used applications.
High Accuracy: Unique reversible base termination and sequencing reaction system, combined with a high-sensitivity fluorescence signal detection system to maximize sequencing accuracy.
Ulter-high sequencing speed: FCM PE150 could finish one run within 24 hours. Flexible FQ upload node, support one or two flow cell in one run.

Applications

Genome sequencing, targeted sequencing, transcriptomics, metagenomics, molecular research, and other next-generation sequencing workflows.

Sequencing performance

Flowcell	Lane	Throughput（Reads/FC）	Type	Read Length	Data output	Q value (balanced mode)	TAT
FCM	4	500 M	100 cycles	SE100	50 Gb×2	Q30≥90% Q40≥85%	12 hr
PE50	50 Gb×2	12 hr
200 cycles	PE100	100 Gb×2	18 hr
300 cycles	PE150	150 Gb×2	22 hr
600 cycles	PE300	300 Gb ×2	48 hr
FCH	4	2000 M	50cycles	SE50	100 Gb×2	14 hr
100cycles	SE100	200 Gb×2	21 hr
PE50	200 Gb×2	21 hr
200cycles	PE100	400 Gb×2	26 hr
300cycles	PE150	600 Gb×2	30 hr
FCP	4	3600 M	50 cycles	SE50	180 Gb×2	16 hr
100 cycles	SE100	360 Gb×2	24 hr
200 cycles	PE100	720 Gb×2	32 hr
300 cycles	PE150	1.1 Tb×2	38 hr

Applications and sample capacity

Application	Read length	Data/sample	FCM*1	FCM*2	FCH*1	FCM1+FCH1	FCH*2
500M	1000M	2000 M	2500M	4000M
WGS	PE150	100Gb/sample	1	2	6	7	12
Target panel（FFPE）	PE150	5Gb/sample	25	50	100	125	200
Target panel （ctDNA）	PE50	10Gb/sample	4	8	16	20	32
RNAseq	PE150	10Gb/sample	12	25	50	62	100
WES	PE150	10Gb/sample	12	25	50	62	100
Single cell	PE150	60Gb/sample	2	4	8	10	16

Instrument specifications

Dimensions	1090mm(L)×690mm(W)×810mm(H)
Weight	240kg
Operating Environment	Temperature:19℃-25℃ Humidity:20%-80% relative humidity, non-condensing Altitude: below 300m
Instrument Control Computer	Operating System:Windows 10 x64 CPU: Intel Xeon Gold 6342 Memory:256GB Hard Drive1: 2TB SSD Hard Drive2: 17TB HDD

Additional technical information

Description of Read Header
Parameter	Description
<SN>	Serial number of the instrument.
<Barcodescore>	Numbers 0 to 9 are used to evaluate the sequencing quality value of the index sequence. The higher the value, the better the quality.
<Flowcell ID>	The ID of the sequence chip.
<Lane>	Number of the lane, it can be L00、L01、L02、L03、L04， etc. L00 indicates that all lanes are merged.
<FOV>	Coordinate of the FOV.
<X>	X-coordinate of the cluster.
<Y>	Y-coordinate of the cluster.
<read1/2>	Read 1 or Read 2.
<N>	Default character.
<0>	Default character.
<Index>	The sequence of the index, if it is a combination of index1 and index2, it should be concatenated with symbol”+”.
Note：@<SN>:<Barcodescore>:<Flowcell ID>:<Lane>:<FOV>:<X>:<Y> <read1/2>:<N>:<0>:<Index> The header identifier is represented by the symbol “@”, while the parameter items are differentiated using the symbol “:”.

Ordering and configuration

Contact Scientific China for availability, supported configurations, compatible consumables, minimum order quantity, installation requirements, lead time, and a formal quotation for the GeneMind SURFSeq 5000 High-Throughput Sequencing System.